Feel free to visit my LinkedIn Profile or download as my
curriculum vitae in PDF
Personal
Born: in Erfurt, Germany March 15th 1967
Citizenship: Germany
Current visa status: Permanent Resident Alien (Green card)
Education
Medical School, Friedrich-Schiller-University
Jena, Germany (1990-93, 1994-96, MD)
Medical School, University of Newcastle upon Tyne, UK
(1993-94, Medicine)
Fully licensed physician in Germany (since 10/98)
Doctor of Medicine doctor medicinae (like PhD),
Friedrich-Schiller-University Jena, Germany (11/1999)
Professional
Experience
Department of Human Genetics, Friedrich-Schiller-University
Jena, Germany (1994-95)
Medical Center, Friedrich-Schiller-University Jena, Germany
(1985-89 and1995-96)
Department of Medical Informatics, Statistics and
Documentation, Friedrich-Schiller-University Jena, Gemany
(1996-99)
Department of Traumatology, Hand- and Reconstructive
Surgery, Medical Center Klinikum Erfurt GmbH,
Germany (1997-98)
Department of Obstetrics and Gynecology, Bethanien Hospital
Moers, Germany (1998-2000)
Cancer Center, University of California, San Diego, USA
(4/2000-3/2001)
San Diego Supercomputer Center, University of California,
San Diego, USA (4/2001 -3/2008)
caBIG Deployment Lead at the UCSD Moores Cancer Center
(4/2008 - present)
Lectures
and Presentations
Tutorial Introduction to Bioinformatics for IEEE
San Diego (2003)
Lecture at UCSD Extension on Object-Oriented Perl
(2002)
Lecture at UCSD Extension on Federated Database
Systems, IBM's Discovery Link software package (2002)
Lecture at the San Diego Community College on Perl,
DBI, CGI , MySQL (2001)
Presentation Development of the Protein Kinase
Resource at the FASEB meeting on protein kinases in
Snowmass, CO (2001)
Past
Research Projects
PhosphoOntology - Ontology to model protein phosphorylation
and dephosphorylation in the context of signaltransduction
with the short-term goal to relate protein kinases in PKR
and protein phosphatases in Phosphabase
Scientific advisor and codeveloper of Patentinformatics - an online
resource on life science related patent information
Development of a comprehensive web accessible compendium of
information on the protein kinase family of enzymes
(Protein Kinase Resource (PKR), now
hosted at Purdue University) that includes tools for
structural and computational analyses as well as links
to related information maintained by others. PKR aims
to be the reference resource for protein kinase
classification and nomenclature.
Collaboration with John Moreland (SDSC) to integrate the
Molecular Biology Toolkit as
graphical front-end to the protein kinase resource
database permitting easy and intuitive information
retrieval and annotation for protein kinase
researchers
Member of the developers team of PlantsP online resource (Functional
Genomics of Plant Phosphorylation)
Collaboration with IBM to built a federated data resource
that allows easy access to important public data resources
in lifescience research in relation database format. Thus
alleviate the frequently redundant efforts by many research
projects to extract the data from flatfiles or served html
pages. This project also includes cross-communication with
several other key projects at SDSC, such as the Alliance for Cellular Signaling
(AfCS), the Protein Data Bank (PDB), the
Encyclopedia of Life (EOL), the Joint Center for Structural
Genomics (JCSG), and others.
Software development on Xserve (Apple) in evaluation of MacOS X
server and LinuxPPC (Yellowdog) as a platform for
Bioinformatics research and applications.
Collaboration with BIOGEM (Microarray facility of
UCSD, Gary Hardiman, Richard Rouse) – Research on
profiling gene expression using a noncompetitive
two-color microarray assay by measuring hybridization
stoichiometry. Building bioinformatics support, and an
annotation and experiment database for the microarrays
manufactured and/or processed by BIOGEM.
Moleculargenetic mechanisms of in vitro and in vivo
resistance against the anticancer drug cisplatin in collaboration with
Stephen Howell at the UCSD Cancer
Center
Other activities
Referee for the Journal of Medicinal Chemistry.
Referee for the Bioinformatics Journal.
Referee for the FEBS Journal (European Journal of
Biochemistry).
Conference coordinator and organizer of the international
event PKR Protein Phosphorylation
Workshop, held in December 2003 in Asilomar (Pacific Grove, CA).
Conference chair and scientific advisor of the 2005 CHI Protein Kinase Targets
conference, Boston
Research
Support
National Science Foundation (NSF) -
NSF/DBI-0217951 (current funding)
Proctor & Gamble Funds (via
Professor Lynn Ten Eyck at the SDSC) (4/2001-8/2002)
German Research Foundation (DFG) -
Grant NI-602 (4/2000-3/2001)
Honors and
Awards
3/2003 Award of Excellence from the San Diego Supercomputer Center
(SDSC) for work on the Protein Kinase Resource (PKR)
4/2000-3/2001 Scholarship from the German Research Foundation (DFG)
1992-96 Fellow of the German National Academic Foundation
(Supporting the leading one percent of all students in
Germany)
1993-94 Scholarship from the German Academic Exchange Service
(DAAD)
1-4/1997 Scholarship from the Friedrich-Schiller-University Jena